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  • Top cofit genes for PS417_26545 from Pseudomonas simiae WCS417

    16S rRNA methyltransferase
    SEED: Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)
    KEGG: ribosomal RNA small subunit methyltransferase E

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02110 acyl carrier protein no 0.31
    2 PS417_04475 hypothetical protein no 0.28
    3 PS417_22555 chemotaxis protein 0.51 0.27
    4 PS417_25625 hypothetical protein 0.60 0.25
    5 PS417_17205 LysR family transcriptional regulator 0.60 0.24
    6 PS417_22410 hypothetical protein 0.15 0.24
    7 PS417_07190 MFS transporter no 0.23
    8 PS417_21100 alpha-L-glutamate ligase 0.59 0.22
    9 PS417_03340 gluconate transporter no 0.22
    10 PS417_06625 hypothetical protein no 0.21
    11 PS417_10965 chemotaxis protein no 0.21
    12 PS417_26375 membrane protein 0.22 0.21
    13 PS417_14960 ATPase no 0.21
    14 PS417_04425 histidinol-phosphate aminotransferase no 0.21
    15 PS417_14865 GntR family transcriptional regulator no 0.20
    16 PS417_02145 potassium transporter KefA no 0.20
    17 PS417_01990 cell division protein no 0.20
    18 PS417_17085 fimbrial assembly protein no 0.20
    19 PS417_27810 ribonuclease PH 0.65 0.20
    20 PS417_18705 succinate dehydrogenase no 0.20

    Or look for negative cofitness