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  • Top cofit genes for PS417_02640 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08345 chemotaxis protein 0.40 0.26
    2 PS417_04270 ribonuclease G 0.75 0.26
    3 PS417_00300 cytochrome B559 subunit alpha no 0.26
    4 PS417_00305 cytochrome oxidase subunit I 0.46 0.25
    5 PS417_26250 peptidase M19 no 0.24
    6 PS417_21420 aminodeoxychorismate lyase no 0.23
    7 PS417_25790 aminoglycoside phosphotransferase no 0.21
    8 PS417_00330 hypothetical protein 0.44 0.21
    9 PS417_23370 protoheme IX farnesyltransferase no 0.21
    10 PS417_26235 (Fe-S)-binding protein 0.43 0.21
    11 PS417_04295 peptidase PmbA 0.36 0.21
    12 PS417_12180 ABC transporter substrate-binding protein no 0.21
    13 PS417_22780 XRE family transcriptional regulator no 0.21
    14 PS417_18390 LacI family transcriptional regulator no 0.21
    15 PS417_22125 porin 0.53 0.20
    16 PS417_12120 IclR family transcriptional regulator no 0.20
    17 PS417_25650 anhydro-N-acetylmuramic acid kinase no 0.20
    18 PS417_10460 selenide, water dikinase no 0.20
    19 PS417_09205 membrane protein no 0.20
    20 PS417_00315 MFS transporter 0.38 0.19

    Or look for negative cofitness