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  • Top cofit genes for PS417_26520 from Pseudomonas simiae WCS417

    amino acid ABC transporter substrate-binding protein
    SEED: periplasmic binding protein, putative

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22190 diguanylate cyclase 0.89 0.52
    2 PS417_02210 diguanylate cyclase 0.83 0.51
    3 PS417_05985 chemotaxis protein CheY 0.84 0.49
    4 PS417_03930 thymidine phosphorylase 0.52 0.49
    5 PS417_19145 membrane protein 0.84 0.48
    6 PS417_19625 histidine kinase 0.26 0.46
    7 PS417_07095 histidine kinase 0.69 0.44
    8 PS417_19635 lipid kinase 0.24 0.42
    9 PS417_19630 LuxR family transcriptional regulator 0.50 0.40
    10 PS417_20585 chemotaxis protein no 0.39
    11 PS417_19615 chemotaxis protein CheW no 0.38
    12 PS417_21600 pilus assembly protein PilZ 0.36 0.37
    13 PS417_21625 DNA-binding protein 0.41 0.35
    14 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.35
    15 PS417_19645 chemotaxis protein 0.29 0.34
    16 PS417_05975 chemotaxis protein CheW no 0.33
    17 PS417_23580 peptidylprolyl isomerase no 0.33
    18 PS417_18705 succinate dehydrogenase no 0.33
    19 PS417_12560 MFS transporter no 0.32
    20 PS417_19800 flagellar motor switch protein FliG 0.32 0.32

    Or look for negative cofitness