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  • Top cofit genes for GFF5159 from Hydrogenophaga sp. GW460-11-11-14-LB1

    Type IV pilus biogenesis protein PilE
    KEGG: type IV pilus assembly protein PilE

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1280 Type IV fimbrial assembly protein PilC 0.99 0.88
    2 GFF2572 Uncharacterized protein with LysM domain, COG1652 0.93 0.87
    3 GFF1279 Type IV fimbrial assembly, ATPase PilB 0.99 0.87
    4 GFF5158 Type IV fimbrial biogenesis protein PilY1 no 0.87
    5 GFF5156 Type IV fimbrial biogenesis protein PilW no 0.86
    6 GFF4664 Type IV pilus biogenesis protein PilZ 0.99 0.84
    7 GFF1337 Type IV pilus biogenesis protein PilM 0.99 0.84
    8 GFF5155 Type IV fimbrial biogenesis protein PilV no 0.84
    9 GFF2510 Type IV pilin PilA no 0.83
    10 GFF551 FIG00931886: hypothetical protein no 0.83
    11 GFF1335 Type IV pilus biogenesis protein PilO 0.84 0.83
    12 GFF5157 Type IV fimbrial biogenesis protein PilX no 0.82
    13 GFF596 Two-component sensor PilS no 0.82
    14 GFF2570 Thymidine phosphorylase (EC 2.4.2.4) no 0.82
    15 GFF1334 Type IV pilus biogenesis protein PilP no 0.81
    16 GFF4865 Type IV pilus biogenesis protein PilF 0.72 0.81
    17 GFF738 Autolysis response regulater LytR 0.93 0.81
    18 GFF1281 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.97 0.80
    19 GFF5154 Type IV fimbrial biogenesis protein FimT no 0.80
    20 GFF1336 Type IV pilus biogenesis protein PilN 0.98 0.79

    Or look for negative cofitness