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  • Top cofit genes for PS417_26385 from Pseudomonas simiae WCS417

    amino acid ABC transporter substrate-binding protein
    SEED: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
    KEGG: polar amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19615 chemotaxis protein CheW 0.25 0.28
    2 PS417_20655 group 1 glycosyl transferase no 0.28
    3 PS417_00595 chemotaxis protein no 0.27
    4 PS417_20645 membrane protein no 0.27
    5 PS417_22190 diguanylate cyclase 0.76 0.27
    6 PS417_19075 ABC transporter ATP-binding protein 0.40 0.27
    7 PS417_20665 hypothetical protein no 0.27
    8 PS417_15220 alkane 1-monooxygenase no 0.27
    9 PS417_03230 TetR family transcriptional regulator no 0.26
    10 PS417_20670 glycosyl transferase family 2 no 0.26
    11 PS417_22325 amino acid APC transporter 0.32 0.26
    12 PS417_20595 hypothetical protein no 0.26
    13 PS417_20660 hypothetical protein no 0.25
    14 PS417_03135 acyl dehydratase no 0.25
    15 PS417_00295 hypothetical protein no 0.24
    16 PS417_00790 curli production assembly protein CsgG no 0.24
    17 PS417_08230 lipopolysaccharide biosynthesis protein RfbH no 0.24
    18 PS417_27995 type IV secretion protein Rhs no 0.23
    19 PS417_16255 RNA polymerase sigma factor no 0.23
    20 PS417_08580 histidine kinase 0.33 0.23

    Or look for negative cofitness