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  • Top cofit genes for PS417_26370 from Pseudomonas simiae WCS417

    RNA helicase
    SEED: ATP-dependent 23S rRNA helicase DbpA
    KEGG: ATP-independent RNA helicase DbpA

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24500 DEAD/DEAH box helicase 0.46 0.63
    2 PS417_04290 hypothetical protein 0.48 0.57
    3 PS417_20930 50S rRNA methyltransferase no 0.57
    4 PS417_19955 hypothetical protein 0.45 0.45
    5 PS417_20650 hypothetical protein no 0.45
    6 PS417_24335 50S rRNA methyltransferase no 0.44
    7 PS417_25645 peptidase M23 no 0.44
    8 PS417_08530 spermidine synthase no 0.41
    9 PS417_26760 oxidase 0.39 0.41
    10 PS417_03260 5S ribosomal RNA no 0.40
    11 PS417_21420 aminodeoxychorismate lyase 0.71 0.39
    12 PS417_20785 transcriptional regulator 0.32 0.39
    13 PS417_01340 agmatine deiminase no 0.38
    14 PS417_02560 23S rRNA methyltransferase 0.67 0.38
    15 PS417_15310 type VI secretion protein 0.21 0.37
    16 PS417_04475 hypothetical protein 0.53 0.36
    17 PS417_02575 membrane protein 0.37 0.36
    18 PS417_21480 23S rRNA pseudouridylate synthase 0.78 0.36
    19 PS417_02975 3-dehydroquinate dehydratase 0.24 0.36
    20 PS417_24230 ATP-dependent protease 0.45 0.36

    Or look for negative cofitness