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  • Top cofit genes for GFF5148 from Variovorax sp. SCN45

    Taurine ABC transporter, substrate-binding protein TauA
    SEED: Taurine-binding periplasmic protein TauA
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5732 Methyl-accepting chemotaxis sensor/transducer protein no 0.59
    2 GFF4104 Cystathionine beta-lyase (EC 4.4.1.8) 0.25 0.58
    3 GFF3029 T6SS component TssM (IcmF/VasK) no 0.54
    4 GFF4726 hypothetical protein no 0.54
    5 GFF3348 Putative lipase no 0.53
    6 GFF5709 no description no 0.52
    7 GFF1186 Ferrichrome-iron receptor no 0.52
    8 GFF6148 hypothetical protein no 0.52
    9 GFF4411 Conjugative transfer protein TrbK 0.40 0.52
    10 GFF6345 Cytochrome c2 no 0.52
    11 GFF4307 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.51
    12 GFF2790 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.50
    13 GFF6813 no description no 0.50
    14 GFF1663 Isocitrate lyase (EC 4.1.3.1) no 0.49
    15 GFF1304 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) no 0.49
    16 GFF6125 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) no 0.48
    17 GFF5920 no description no 0.48
    18 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.48
    19 GFF6474 hypothetical protein no 0.47
    20 GFF803 MutT/Nudix family protein 0.25 0.47

    Or look for negative cofitness