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  • Top cofit genes for GFF5145 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2379 Serine/threonine protein kinase no 0.78
    2 GFF4485 FIG00715336: hypothetical protein no 0.77
    3 GFF2154 twitching motility protein PilJ no 0.76
    4 GFF2151 twitching motility protein PilG no 0.76
    5 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) no 0.74
    6 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.74
    7 GFF2510 Type IV fimbrial assembly, ATPase PilB no 0.73
    8 GFF2509 Type IV fimbrial assembly protein PilC no 0.72
    9 GFF5323 Type IV pilus biogenesis protein PilQ no 0.72
    10 GFF5322 Type IV pilus biogenesis protein PilP no 0.72
    11 GFF5419 Type IV pilus biogenesis protein PilE no 0.72
    12 GFF5320 Type IV pilus biogenesis protein PilN no 0.71
    13 GFF5415 Type IV fimbrial biogenesis protein PilV no 0.71
    14 GFF5490 Uncharacterized protein with LysM domain, COG1652 no 0.71
    15 GFF5417 hypothetical protein no 0.71
    16 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.71
    17 GFF33 Type IV pilus biogenesis protein PilZ no 0.71
    18 GFF4432 Two-component system response regulator protein no 0.71
    19 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.70
    20 GFF5414 hypothetical protein no 0.70

    Or look for negative cofitness