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  • Top cofit genes for PS417_26340 from Pseudomonas simiae WCS417

    betaine-aldehyde dehydrogenase
    SEED: Betaine aldehyde dehydrogenase (EC 1.2.1.8)
    KEGG: betaine-aldehyde dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26345 choline dehydrogenase 0.93 0.58
    2 PS417_26335 BetI family transcriptional regulator 0.80 0.41
    3 PS417_14965 transcriptional regulator 0.27 0.32
    4 PS417_01520 arsenic resistance protein no 0.30
    5 PS417_14945 beta-lactamase no 0.30
    6 PS417_27740 MFS transporter 0.55 0.28
    7 PS417_02145 potassium transporter KefA no 0.27
    8 PS417_01340 agmatine deiminase 0.39 0.25
    9 PS417_27920 type VI secretion protein IcmF 0.36 0.25
    10 PS417_14960 ATPase no 0.23
    11 PS417_22250 pseudouridine synthase 0.25 0.23
    12 PS417_03005 arginine decarboxylase 0.21 0.23
    13 PS417_24500 DEAD/DEAH box helicase 0.30 0.22
    14 PS417_03000 translation initiation factor Sui1 no 0.22
    15 PS417_05910 glucan biosynthesis protein D no 0.22
    16 PS417_27245 aminotransferase DegT no 0.21
    17 PS417_04010 glycine/betaine ABC transporter ATP-binding protein 0.25 0.21
    18 PS417_20930 50S rRNA methyltransferase no 0.21
    19 PS417_12820 hypothetical protein no 0.21
    20 PS417_00075 hypothetical protein 0.54 0.21

    Or look for negative cofitness