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  • Top cofit genes for PS417_26335 from Pseudomonas simiae WCS417

    BetI family transcriptional regulator
    SEED: HTH-type transcriptional regulator BetI
    KEGG: TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26340 betaine-aldehyde dehydrogenase 0.80 0.40
    2 PS417_26345 choline dehydrogenase 0.84 0.37
    3 PS417_27740 MFS transporter 0.64 0.27
    4 PS417_22535 ornithine acetyltransferase 0.26 0.20
    5 PS417_02145 potassium transporter KefA no 0.19
    6 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase 0.23 0.19
    7 PS417_19040 aspartate racemase no 0.18
    8 PS417_14965 transcriptional regulator no 0.18
    9 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.24 0.17
    10 PS417_22575 exonuclease I no 0.17
    11 PS417_01520 arsenic resistance protein no 0.17
    12 PS417_14115 molybdate ABC transporter substrate-binding protein no 0.16
    13 PS417_05045 acetamidase no 0.16
    14 PS417_02555 exoribonuclease R 0.48 0.16
    15 PS417_19540 hypothetical protein no 0.16
    16 PS417_23215 RNA methyltransferase 0.66 0.16
    17 PS417_20600 hypothetical protein no 0.16
    18 PS417_02480 DNA mismatch repair protein 0.73 0.16
    19 PS417_03300 alanine acetyltransferase 0.57 0.16
    20 PS417_25635 biotin--protein ligase no 0.15

    Or look for negative cofitness