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  • Top cofit genes for PS417_26305 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator
    SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21230 cytochrome C 0.33 0.23
    2 PS417_17690 amidase no 0.21
    3 PS417_18935 amino acid ABC transporter ATPase no 0.19
    4 PS417_14260 phosphate ABC transporter permease no 0.19
    5 PS417_09215 MFS transporter no 0.19
    6 PS417_01015 polar amino acid ABC transporter permease no 0.19
    7 PS417_27085 AraC family transcriptional regulator no 0.18
    8 PS417_10420 shikimate dehydrogenase no 0.18
    9 PS417_11415 hypothetical protein no 0.18
    10 PS417_11550 FAD-binding oxidoreductase no 0.18
    11 PS417_02795 acetyltransferase no 0.18
    12 PS417_07530 multidrug transporter no 0.18
    13 PS417_04020 glycine/betaine ABC transporter substrate-binding protein 0.43 0.18
    14 PS417_25370 hypothetical protein no 0.18
    15 PS417_14135 ABC transporter ATP-binding protein no 0.17
    16 PS417_27675 xanthine phosphoribosyltransferase no 0.17
    17 PS417_00995 alpha/beta hydrolase no 0.17
    18 PS417_28110 transglycosylase no 0.17
    19 PS417_05725 baseplate J protein no 0.16
    20 PS417_27250 glycine cleavage system protein H 0.23 0.16

    Or look for negative cofitness