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  • Top cofit genes for PS417_26270 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator
    SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08415 hypothetical protein 0.29 0.20
    2 PS417_01370 peptidase M48 no 0.19
    3 PS417_10940 sugar ABC transporter substrate-binding protein no 0.18
    4 PS417_11130 peptide ABC transporter substrate-binding protein no 0.18
    5 PS417_14590 LysR family transcriptional regulator 0.28 0.18
    6 PS417_10215 hypothetical protein no 0.17
    7 PS417_26470 cytochrome C no 0.17
    8 PS417_25290 hypothetical protein no 0.17
    9 PS417_12145 acetoacetyl-CoA synthetase 0.63 0.17
    10 PS417_15540 NUDIX hydrolase no 0.16
    11 PS417_08445 2-dehydropantoate 2-reductase no 0.16
    12 PS417_23825 penicillin-binding protein no 0.16
    13 PS417_01820 chemotaxis protein no 0.16
    14 PS417_05250 hypothetical protein no 0.16
    15 PS417_26320 ABC transporter permease 0.81 0.16
    16 PS417_26910 membrane protein no 0.16
    17 PS417_19445 membrane protein 0.29 0.15
    18 PS417_15715 nitrate reductase no 0.15
    19 PS417_22960 hypothetical protein no 0.15
    20 PS417_15690 ribonucleoside-triphosphate reductase 0.53 0.15

    Or look for negative cofitness