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Cofit
Protein
Homologs
Top cofit genes for GFF5128 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2153
type IV pili signal transduction protein PilI
no
0.87
2
GFF3743
Twitching motility protein PilT
no
0.86
3
GFF6290
RNA polymerase sigma-54 factor RpoN
no
0.79
4
GFF3886
Putative transmembrane protein
no
0.78
5
GFF6075
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
no
0.78
6
GFF2519
FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
no
0.78
7
GFF5416
Type IV fimbrial biogenesis protein PilW
no
0.77
8
GFF2155
Signal transduction histidine kinase CheA
no
0.76
9
GFF5418
Type IV fimbrial biogenesis protein PilY1
no
0.75
10
GFF5414
hypothetical protein
no
0.75
11
GFF5319
Type IV pilus biogenesis protein PilM
no
0.75
12
GFF5321
Type IV pilus biogenesis protein PilO
no
0.75
13
GFF993
Type IV pilus biogenesis protein PilF
no
0.75
14
GFF5417
hypothetical protein
no
0.75
15
GFF5419
Type IV pilus biogenesis protein PilE
no
0.75
16
GFF5415
Type IV fimbrial biogenesis protein PilV
no
0.75
17
GFF4432
Two-component system response regulator protein
no
0.74
18
GFF6723
Cysteine desulfurase (EC 2.8.1.7)
no
0.74
19
GFF2509
Type IV fimbrial assembly protein PilC
0.45
0.74
20
GFF3826
Response regulator receiver:LytTr DNA-binding region
no
0.74
Or look for
negative cofitness