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  • Top cofit genes for GFF5128 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2153 type IV pili signal transduction protein PilI no 0.87
    2 GFF3743 Twitching motility protein PilT no 0.86
    3 GFF6290 RNA polymerase sigma-54 factor RpoN no 0.79
    4 GFF3886 Putative transmembrane protein no 0.78
    5 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB no 0.78
    6 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) no 0.78
    7 GFF5416 Type IV fimbrial biogenesis protein PilW no 0.77
    8 GFF2155 Signal transduction histidine kinase CheA no 0.76
    9 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.75
    10 GFF5414 hypothetical protein no 0.75
    11 GFF5319 Type IV pilus biogenesis protein PilM no 0.75
    12 GFF5321 Type IV pilus biogenesis protein PilO no 0.75
    13 GFF993 Type IV pilus biogenesis protein PilF no 0.75
    14 GFF5417 hypothetical protein no 0.75
    15 GFF5419 Type IV pilus biogenesis protein PilE no 0.75
    16 GFF5415 Type IV fimbrial biogenesis protein PilV no 0.75
    17 GFF4432 Two-component system response regulator protein no 0.74
    18 GFF6723 Cysteine desulfurase (EC 2.8.1.7) no 0.74
    19 GFF2509 Type IV fimbrial assembly protein PilC 0.45 0.74
    20 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.74

    Or look for negative cofitness