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  • Top cofit genes for PS417_26240 from Pseudomonas simiae WCS417

    N-methylproline demethylase
    SEED: DgcA Dimethylglycine demethylase subunit A

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26235 (Fe-S)-binding protein 0.97 0.45
    2 PS417_26225 electron transfer flavoprotein subunit beta 0.99 0.44
    3 PS417_22780 XRE family transcriptional regulator 0.73 0.43
    4 PS417_22775 histidine kinase 0.29 0.43
    5 PS417_16510 Clp protease ClpX 0.75 0.37
    6 PS417_19685 protein phosphatase 0.33 0.37
    7 PS417_12120 IclR family transcriptional regulator no 0.36
    8 PS417_26250 peptidase M19 0.98 0.35
    9 PS417_04340 ribosome hibernation promoting factor HPF 0.18 0.35
    10 PS417_16990 acyl-CoA dehydrogenase 0.43 0.35
    11 PS417_15380 hypothetical protein 0.75 0.34
    12 PS417_20920 D-alanyl-D-alanine carboxypeptidase 0.51 0.34
    13 PS417_24710 lipoprotein no 0.34
    14 PS417_26230 electron transfer flavoprotein subunit alpha 0.98 0.33
    15 PS417_26215 ferredoxin 0.96 0.33
    16 PS417_14920 CoA-transferase no 0.33
    17 PS417_18540 colicin V production CvpA no 0.33
    18 PS417_02955 hypothetical protein no 0.33
    19 PS417_13295 TetR family transcriptional regulator no 0.33
    20 PS417_22125 porin 0.40 0.33

    Or look for negative cofitness