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  • Top cofit genes for PS417_26215 from Pseudomonas simiae WCS417

    ferredoxin
    SEED: GbcB Glycine betaine demethylase subunit B

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22780 XRE family transcriptional regulator 0.61 0.40
    2 PS417_26225 electron transfer flavoprotein subunit beta 0.97 0.38
    3 PS417_22775 histidine kinase 0.81 0.37
    4 PS417_26235 (Fe-S)-binding protein 0.96 0.35
    5 PS417_16510 Clp protease ClpX 0.50 0.35
    6 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase 0.26 0.35
    7 PS417_22125 porin 0.24 0.35
    8 PS417_26230 electron transfer flavoprotein subunit alpha 0.96 0.34
    9 PS417_26240 N-methylproline demethylase 0.96 0.33
    10 PS417_22850 virulence factor family protein 0.30 0.32
    11 PS417_01795 glucosyltransferase MdoH 0.50 0.30
    12 PS417_19685 protein phosphatase 0.60 0.30
    13 PS417_25645 peptidase M23 no 0.30
    14 PS417_12805 glycogen branching protein 0.47 0.30
    15 PS417_26760 oxidase 0.43 0.29
    16 PS417_02975 3-dehydroquinate dehydratase no 0.29
    17 PS417_04275 hypothetical protein 0.26 0.29
    18 PS417_14915 host specificity protein 0.28 0.29
    19 PS417_26180 sarcosine oxidase subunit alpha 0.97 0.29
    20 PS417_16005 ATPase 0.38 0.29

    Or look for negative cofitness