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  • Top cofit genes for GFF5116 from Variovorax sp. SCN45

    Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
    SEED: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
    KEGG: glycolate oxidase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) 0.53 0.72
    2 GFF2602 no description no 0.70
    3 GFF945 Excinuclease ABC subunit B 0.33 0.69
    4 GFF2539 FAD/FMN-containing dehydrogenases no 0.68
    5 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.65 0.66
    6 GFF3338 Threonine efflux protein no 0.66
    7 GFF2065 Peptidase, M23/M37 family no 0.66
    8 GFF211 protein of unknown function UPF0125 no 0.65
    9 GFF5617 Coenzyme A ligase no 0.65
    10 GFF5984 L-lactate dehydrogenase 0.30 0.64
    11 GFF2522 Glutaredoxin-related protein 0.54 0.64
    12 GFF816 L-carnitine dehydratase/bile acid-inducible protein F no 0.63
    13 GFF4304 Cyclohexanecarboxylate--CoA ligase no 0.63
    14 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.62
    15 GFF107 General secretion pathway protein K no 0.62
    16 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.31 0.61
    17 GFF2859 Excinuclease ABC subunit C 0.34 0.61
    18 GFF1204 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) 0.41 0.61
    19 GFF448 Adenosylcobinamide kinase (EC 2.7.1.156) / Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 0.53 0.61
    20 GFF446 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) no 0.61

    Or look for negative cofitness