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  • Top cofit genes for PS417_26195 from Pseudomonas simiae WCS417

    serine hydroxymethyltransferase
    SEED: Serine hydroxymethyltransferase (EC 2.1.2.1)
    KEGG: glycine hydroxymethyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03935 N-acetyl-anhydromuranmyl-L-alanine amidase no 0.23
    2 PS417_16425 sprT no 0.21
    3 PS417_09825 hypothetical protein no 0.21
    4 PS417_08340 type IV secretion protein Rhs no 0.18
    5 PS417_00310 cysteine synthase no 0.18
    6 PS417_28350 fatty acid methyltransferase 0.49 0.17
    7 PS417_21975 glutamate-pyruvate aminotransferase 0.40 0.17
    8 PS417_15190 acyl-CoA dehydrogenase 0.47 0.17
    9 PS417_15140 3-carboxymuconate cyclase no 0.17
    10 PS417_00150 4,5-dioxygenase 0.59 0.17
    11 PS417_14325 AraC family transcriptional regulator 0.56 0.16
    12 PS417_08470 hypothetical protein no 0.16
    13 PS417_01970 pilus assembly protein no 0.16
    14 PS417_13455 alkaline proteinase inhibitor 0.56 0.16
    15 PS417_19285 ankyrin 0.44 0.16
    16 PS417_16510 Clp protease ClpX no 0.16
    17 PS417_00590 5S ribosomal RNA no 0.16
    18 PS417_00765 filamentous hemagglutinin no 0.16
    19 PS417_12490 autotransporter adhesin 0.25 0.16
    20 PS417_27740 MFS transporter no 0.16

    Or look for negative cofitness