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  • Top cofit genes for PS417_26185 from Pseudomonas simiae WCS417

    sarcosine oxidase subunit delta
    SEED: Sarcosine oxidase delta subunit (EC 1.5.3.1)
    KEGG: sarcosine oxidase, subunit delta

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26190 sarcosine oxidase subunit beta 0.96 0.24
    2 PS417_13820 UDP-glucose 6-dehydrogenase no 0.24
    3 PS417_22125 porin 0.21 0.24
    4 PS417_26250 peptidase M19 0.95 0.22
    5 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase 0.58 0.22
    6 PS417_13805 4-amino-4-deoxy-L-arabinose transferase 0.63 0.22
    7 PS417_21510 histidine kinase no 0.22
    8 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.56 0.21
    9 PS417_24835 hypothetical protein 0.56 0.20
    10 PS417_01600 peptidase M23 no 0.20
    11 PS417_24945 LuxR family transcriptional regulator no 0.20
    12 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase no 0.20
    13 PS417_01995 hypothetical protein 0.31 0.20
    14 PS417_16515 Clp protease ClpS no 0.20
    15 PS417_21515 transcriptional regulator no 0.19
    16 PS417_26180 sarcosine oxidase subunit alpha 0.96 0.19
    17 PS417_08345 chemotaxis protein no 0.19
    18 PS417_21530 histidine kinase no 0.19
    19 PS417_27535 chemotaxis protein CheY no 0.18
    20 PS417_07470 hypothetical protein no 0.18

    Or look for negative cofitness