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  • Top cofit genes for GFF5111 from Variovorax sp. SCN45

    Permease of the drug/metabolite transporter (DMT) superfamily
    SEED: PROBABLE TRANSMEMBRANE PROTEIN

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6307 hypothetical protein no 0.57
    2 GFF3344 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains no 0.56
    3 GFF7124 Mobile element protein no 0.56
    4 GFF5847 putative membrane protein no 0.51
    5 GFF5273 Various polyols ABC transporter, permease protein 1 no 0.51
    6 GFF1472 Tricarboxylate transport protein TctC no 0.48
    7 GFF7215 Transcriptional regulator, LysR family no 0.48
    8 GFF3379 Aromatic--CoA ligase no 0.48
    9 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.48
    10 GFF4002 Putative transmembrane protein no 0.47
    11 GFF2121 Type IV fimbrial biogenesis protein PilY1 no 0.47
    12 GFF520 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.46
    13 GFF5649 Selenide,water dikinase (EC 2.7.9.3) no 0.46
    14 GFF7372 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) no 0.46
    15 GFF4801 DedA protein no 0.45
    16 GFF2312 Regulatory protein, LuxR:Response regulator receiver no 0.45
    17 GFF6342 Mobile element protein no 0.44
    18 GFF4197 Transcriptional regulator, LysR family no 0.44
    19 GFF5268 protein of unknown function DUF805 no 0.44
    20 GFF4769 Outer membrane factor (OMF) lipoprotein associated wth EmrAB-OMF efflux system no 0.44

    Or look for negative cofitness