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  • Top cofit genes for GFF511 from Sphingobium sp. HT1-2

    DNA-binding response regulator
    SEED: Two-component system regulatory protein
    KEGG: two-component system, OmpR family, response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1868 Sodium/bile acid symporter family no 0.80
    2 GFF1505 FIG004655: Polysaccharide deacetylase no 0.69
    3 GFF2865 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase no 0.69
    4 GFF2305 hypothetical protein no 0.67
    5 GFF70 hypothetical protein no 0.67
    6 GFF496 hypothetical protein no 0.66
    7 GFF3936 Phosphate starvation-inducible protein PhoH, predicted ATPase no 0.66
    8 GFF2053 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.73 0.66
    9 GFF4099 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.39 0.65
    10 GFF623 hypothetical protein no 0.64
    11 GFF5073 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases no 0.64
    12 GFF2992 Two-component transcriptional response regulator SMc02366, LuxR family 0.36 0.64
    13 GFF508 Nucleoside permease NupC no 0.64
    14 GFF1342 DNA primase, phage associated no 0.63
    15 GFF1034 Transcriptional regulator, MarR family no 0.63
    16 GFF2433 hypothetical protein no 0.63
    17 GFF3663 Beta-lactamase class A-like and penicillin binding proteins (PBPs) superfamily no 0.63
    18 GFF343 Glycosyl transferase, group 1 family protein no 0.62
    19 GFF2835 hypothetical protein no 0.62
    20 GFF893 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.61

    Or look for negative cofitness