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  • Top cofit genes for GFF5107 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4548 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.60
    2 GFF4671 putative membrane protein no 0.59
    3 GFF6104 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.57
    4 GFF4313 2-dehydropantoate 2-reductase (EC 1.1.1.169) no 0.57
    5 GFF4858 Transposase no 0.56
    6 GFF6939 ABC-type antimicrobial peptide transport system, permease component no 0.55
    7 GFF2645 Acyl dehydratase no 0.54
    8 GFF1220 Transcriptional regulator, MerR family no 0.53
    9 GFF5858 heme uptake regulator no 0.53
    10 GFF3256 Peptidase, M20/M25/M40 family no 0.52
    11 GFF2643 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.52
    12 GFF1745 Acyl-CoA dehydrogenase no 0.51
    13 GFF6366 T6SS component TssG (ImpH/VasB) no 0.51
    14 GFF1742 hypothetical protein no 0.51
    15 GFF2559 hypothetical protein no 0.51
    16 GFF4933 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) no 0.50
    17 GFF7100 similar to protocatechuate 4,5-dioxygenase beta chain no 0.50
    18 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter no 0.49
    19 GFF1152 Lysine decarboxylase family no 0.49
    20 GFF539 no description no 0.49

    Or look for negative cofitness