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Cofit
Protein
Homologs
Top cofit genes for PS417_26160 from
Pseudomonas simiae WCS417
hypothetical protein
SEED: RNA polymerase sigma factor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_15050
3-methyladenine DNA glycosylase
0.44
0.21
2
PS417
_15900
TonB-dependent receptor
no
0.20
3
PS417
_26050
response regulator
no
0.19
4
PS417
_16960
fimbrial protein
no
0.19
5
PS417
_19200
fumarate hydratase
no
0.19
6
PS417
_17950
hypothetical protein
no
0.18
7
PS417
_23890
ATPase
no
0.18
8
PS417
_11550
FAD-binding oxidoreductase
no
0.18
9
PS417
_24880
hypothetical protein
no
0.17
10
PS417
_25115
lipopolysaccharide biosynthesis protein
no
0.17
11
PS417
_07985
AbrB family transcriptional regulator
no
0.17
12
PS417
_27635
magnesium chelatase
no
0.17
13
PS417
_08320
metal-chelation protein CHAD
no
0.17
14
PS417
_11130
peptide ABC transporter substrate-binding protein
no
0.17
15
PS417
_27955
EvpB family type VI secretion protein
no
0.17
16
PS417
_02815
urea ABC transporter ATP-binding protein
no
0.16
17
PS417
_03015
hypothetical protein
no
0.16
18
PS417
_16500
arginyl-tRNA-protein transferase
no
0.16
19
PS417
_03375
hypothetical protein
no
0.16
20
PS417
_15280
type VI secretion protein
no
0.16
Or look for
negative cofitness