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  • Top cofit genes for GFF5103 from Variovorax sp. SCN45

    Class II aldolase/adducin, N-terminal
    SEED: Class II aldolase/adducin, N-terminal

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2939 hypothetical protein no 0.59
    2 GFF1186 Ferrichrome-iron receptor no 0.55
    3 GFF1243 transglutaminase, N-terminal domain protein no 0.54
    4 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.53
    5 GFF803 MutT/Nudix family protein no 0.53
    6 GFF5377 Transcriptional regulator, AcrR family no 0.52
    7 GFF2201 hypothetical protein no 0.52
    8 GFF1034 UPF0313 [4Fe-4S] protein YgiQ no 0.50
    9 GFF5709 no description no 0.50
    10 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.50
    11 GFF7358 Phenylacetate ABC transporter, permease protein 2 no 0.50
    12 GFF3577 Transcriptional regulator, LysR family no 0.49
    13 GFF3773 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.48
    14 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.48
    15 GFF2738 hypothetical protein no 0.48
    16 GFF7185 no description no 0.48
    17 GFF6927 Transcriptional regulator, ArsR family no 0.48
    18 GFF2957 UPF0192 protein YfaS no 0.47
    19 GFF3380 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) no 0.47
    20 GFF6217 hypothetical protein no 0.47

    Or look for negative cofitness