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  • Top cofit genes for PS417_26140 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Two-component response regulator CreB
    KEGG: two-component system, OmpR family, catabolic regulation response regulator CreB

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04730 bifunctional glyoxylate/hydroxypyruvate reductase B 0.69 0.20
    2 PS417_15410 hypothetical protein no 0.19
    3 PS417_06105 TetR family transcriptional regulator 0.65 0.19
    4 PS417_13880 histidine kinase no 0.18
    5 PS417_08500 LysR family transcriptional regulator 0.73 0.18
    6 PS417_14155 branched-chain amino acid ABC transporter permease no 0.18
    7 PS417_19920 AraC family transcriptional regulator 0.71 0.17
    8 PS417_26360 MFS transporter no 0.17
    9 PS417_20190 nitrate reductase no 0.17
    10 PS417_02865 peptidase 0.40 0.17
    11 PS417_01335 hypothetical protein 0.57 0.17
    12 PS417_18295 histidine kinase 0.12 0.16
    13 PS417_08455 universal stress protein UspA no 0.16
    14 PS417_02365 hypothetical protein no 0.16
    15 PS417_12240 lysine decarboxylase 0.32 0.16
    16 PS417_20545 porin no 0.16
    17 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase no 0.16
    18 PS417_10615 hypothetical protein no 0.16
    19 PS417_03360 histidine kinase no 0.16
    20 PS417_00330 hypothetical protein no 0.16

    Or look for negative cofitness