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  • Top cofit genes for GFF5101 from Variovorax sp. SCN45

    Dihydroxy-acid dehydratase (EC 4.2.1.9)
    SEED: Dihydroxy-acid dehydratase (EC 4.2.1.9)
    KEGG: dihydroxy-acid dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4018 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.63
    2 GFF5813 Heavy metal sensor histidine kinase no 0.59
    3 GFF787 hypothetical protein no 0.58
    4 GFF5917 T6SS component TssB (ImpB/VipA) no 0.57
    5 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.57
    6 GFF3547 no description no 0.56
    7 GFF2101 no description no 0.56
    8 GFF5969 Transcriptional regulator, GntR family no 0.55
    9 GFF4870 Glycosidases no 0.55
    10 GFF264 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.55
    11 GFF808 Polyhydroxyalkanoic acid synthase no 0.55
    12 GFF2893 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) no 0.54
    13 GFF6549 no description no 0.53
    14 GFF4309 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.53
    15 GFF833 Proteins containing SET domain no 0.53
    16 GFF3057 Aspartate aminotransferase (EC 2.6.1.1) no 0.52
    17 GFF2446 FIG00956403: hypothetical protein no 0.52
    18 GFF37 Similar to Agmatine deiminase no 0.52
    19 GFF2617 no description no 0.51
    20 GFF4640 hypothetical protein no 0.51

    Or look for negative cofitness