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  • Top cofit genes for PS417_26130 from Pseudomonas simiae WCS417

    membrane protein
    SEED: Inner membrane protein CreD
    KEGG: inner membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11935 ABC transporter substrate-binding protein 0.18 0.24
    2 PS417_20175 LysR family transcriptional regulator 0.39 0.22
    3 PS417_17665 ABC transporter permease no 0.22
    4 PS417_10565 LysR family transcriptional regulator no 0.21
    5 PS417_03950 hypothetical protein 0.52 0.21
    6 PS417_24430 3-dehydroquinate dehydratase 0.53 0.21
    7 PS417_21370 allantoin permease no 0.20
    8 PS417_18230 amidase no 0.20
    9 PS417_09595 membrane protein no 0.20
    10 PS417_13650 LacI family transcriptional regulator no 0.19
    11 PS417_03105 secretin no 0.19
    12 PS417_21155 hypothetical protein no 0.19
    13 PS417_22965 DNA mismatch repair protein MutT 0.48 0.18
    14 PS417_28250 cell wall assembly protein no 0.18
    15 PS417_13920 hypothetical protein no 0.18
    16 PS417_01905 poly(R)-hydroxyalkanoic acid synthase 0.21 0.18
    17 PS417_02100 membrane protein no 0.17
    18 PS417_05405 L-alanine and D-alanine permease (from data) 0.28 0.17
    19 PS417_19935 hypothetical protein no 0.17
    20 PS417_11835 MFS transporter 0.17 0.17

    Or look for negative cofitness