• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF5097 from Variovorax sp. SCN45

    5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
    SEED: 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
    KEGG: 5-carboxymethyl-2-hydroxymuconate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7160 hypothetical protein no 0.67
    2 GFF5813 Heavy metal sensor histidine kinase no 0.66
    3 GFF2122 Type IV pilus biogenesis protein PilE no 0.62
    4 GFF5411 CAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily no 0.57
    5 GFF3147 hypothetical protein no 0.56
    6 GFF3369 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis no 0.56
    7 GFF7282 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) no 0.55
    8 GFF273 Transcriptional regulator, Xre family no 0.55
    9 GFF3547 no description no 0.54
    10 GFF2963 Efflux transport system, outer membrane factor (OMF) lipoprotein 0.24 0.54
    11 GFF5071 AmpG permease no 0.54
    12 GFF3978 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.54
    13 GFF1832 TRAP transporter solute receptor, unknown substrate 3 no 0.53
    14 GFF4266 Alkanal monooxygenase alpha chain (EC 1.14.14.3) no 0.53
    15 GFF4469 Cell division protein FtsA no 0.53
    16 GFF665 hypothetical protein no 0.53
    17 GFF4911 Nudix-like NDP and NTP phosphohydrolase NudJ 0.46 0.52
    18 GFF17 hypothetical protein no 0.52
    19 GFF4803 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.21 0.52
    20 GFF2987 CBS domain protein no 0.52

    Or look for negative cofitness