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  • Top cofit genes for GFF5094 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6086 Putative short-chain dehydrogenase no 0.59
    2 GFF1462 L-carnitine dehydratase/bile acid-inducible protein F no 0.55
    3 GFF3386 hypothetical protein no 0.53
    4 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) no 0.53
    5 GFF5179 Acetyltransferase, GNAT family no 0.52
    6 GFF2450 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) no 0.50
    7 GFF5844 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A no 0.49
    8 GFF6558 5'-nucleotidase (EC 3.1.3.5) no 0.49
    9 GFF6635 FIG00441227: hypothetical protein no 0.48
    10 GFF5612 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) no 0.48
    11 GFF3231 hypothetical protein no 0.48
    12 GFF3730 Integral membrane protein no 0.47
    13 GFF3399 Benzoate--CoA ligase (EC 6.2.1.25) no 0.46
    14 GFF1514 hypothetical protein no 0.46
    15 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake no 0.46
    16 GFF2947 3'-5' exonuclease no 0.46
    17 GFF4929 Aminotransferase, class III no 0.46
    18 GFF7260 hypothetical protein no 0.46
    19 GFF4444 Predicted nucleotidyltransferase 0.23 0.46
    20 GFF6235 hypothetical protein no 0.45

    Or look for negative cofitness