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  • Top cofit genes for GFF5094 from Sphingobium sp. HT1-2

    Type IV secretory pathway, VirD2 components (relaxase)
    SEED: Type IV secretory pathway, VirD2 components (relaxase)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1650 hypothetical protein no 0.90
    2 GFF3983 hypothetical protein no 0.87
    3 GFF2031 hypothetical protein no 0.87
    4 GFF3914 Chloride channel protein no 0.86
    5 GFF3644 hypothetical protein no 0.86
    6 GFF2024 Rhamnogalacturonan endolyase (EC 4.2.2.23) no 0.86
    7 GFF5038 hypothetical protein no 0.86
    8 GFF4128 Membrane alanine aminopeptidase N (EC 3.4.11.2) no 0.85
    9 GFF409 Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9) no 0.85
    10 GFF2452 Thioesterase no 0.84
    11 GFF3033 RNA polymerase, sigma-24 subunit, ECF subfamily no 0.84
    12 GFF2377 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.84
    13 GFF3869 Transcriptional regulator, HxlR family / Domain of unknown function no 0.84
    14 GFF5052 Pirin no 0.83
    15 GFF3474 hypothetical protein no 0.83
    16 GFF5113 hypothetical protein no 0.83
    17 GFF3679 hypothetical protein no 0.82
    18 GFF2824 alpha-L-fucosidase (EC 3.2.1.51) no 0.82
    19 GFF2709 hypothetical protein no 0.82
    20 GFF3834 Protein QmcA (possibly involved in integral membrane quality control) no 0.82

    Or look for negative cofitness