• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_26065 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01355 membrane protein no 0.30
    2 PS417_22700 RNA polymerase subunit sigma-24 0.57 0.23
    3 PS417_14480 glycogen synthase 0.36 0.22
    4 PS417_03075 hypothetical protein no 0.22
    5 PS417_20155 23S rRNA methyltransferase 0.24 0.22
    6 PS417_25320 dTDP-4-dehydrorhamnose reductase no 0.22
    7 PS417_23830 hypothetical protein no 0.20
    8 PS417_14155 branched-chain amino acid ABC transporter permease 0.23 0.20
    9 PS417_13585 alpha/beta hydrolase no 0.20
    10 PS417_04565 cell envelope biogenesis protein OmpA no 0.19
    11 PS417_27505 transcriptional regulator no 0.19
    12 PS417_12190 microcin ABC transporter ATP-binding protein 0.33 0.19
    13 PS417_00180 tryptophan synthase subunit alpha 0.38 0.19
    14 PS417_12395 aminopeptidase N no 0.19
    15 PS417_03370 porin no 0.18
    16 PS417_01820 chemotaxis protein no 0.18
    17 PS417_07050 membrane protein no 0.18
    18 PS417_25955 LysR family transcriptional regulator 0.48 0.18
    19 PS417_04805 poly(beta-D-mannuronate) O-acetylase no 0.18
    20 PS417_14835 amidase 0.25 0.18

    Or look for negative cofitness