Top cofit genes for GFF5067 from Variovorax sp. SCN45

Transcriptional regulator, LysR family

Rank Hit Name Description Conserved? Cofitness  
1 GFF6077 G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27) no 0.55
2 GFF6711 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.50
3 GFF265 RND efflux system, membrane fusion protein no 0.49
4 GFF1817 5-hydroxyisourate hydrolase (EC 3.5.2.17) no 0.47
5 GFF2288 Glutathione-regulated potassium-efflux system protein KefC no 0.46
6 GFF5288 Uncharacterized protein PA4513 no 0.44
7 GFF458 Aldoxime dehydratase no 0.43
8 GFF3130 hypothetical protein no 0.43
9 GFF5528 Conjugative transfer protein TrbL no 0.42
10 GFF6099 Ser/Thr protein phosphatase family protein no 0.42
11 GFF844 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.42
12 GFF2199 Type I secretion outer membrane protein, TolC family no 0.42
13 GFF2802 DUF1176 domain-containing protein no 0.42
14 GFF6678 Putative inner membrane protein no 0.41
15 GFF6079 hypothetical protein no 0.41
16 GFF4518 Methylglyoxal reductase, dihydroxyacetone producing @ 2,5-didehydrogluconate reductase (2-dehydro-L-gulonate-forming) (EC 1.1.1.346) no 0.41
17 GFF2171 MBL-fold metallohydrolase SPO0683 no 0.41
18 GFF6059 ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) no 0.41
19 GFF456 Transcriptional regulator, AraC family no 0.41
20 GFF6324 Kup system potassium uptake protein no 0.41

Or look for negative cofitness