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  • Top cofit genes for PS417_25930 from Pseudomonas simiae WCS417

    pyrroloquinoline quinone biosynthesis protein PqqC
    SEED: Pyrroloquinoline-quinone synthase (EC 1.3.3.11)
    KEGG: pyrroloquinoline-quinone synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17435 dehydrogenase 0.88 0.86
    2 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE 0.93 0.85
    3 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF 0.92 0.83
    4 PS417_17485 membrane protein 0.80 0.81
    5 PS417_17495 multidrug ABC transporter permease 0.79 0.78
    6 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein 0.76 0.76
    7 PS417_17420 ethanol oxidation regulatory protein ercA (from data) 0.70 0.76
    8 PS417_17425 hypothetical protein no 0.71
    9 PS417_17415 histidine kinase 0.92 0.70
    10 PS417_17450 amino acid ABC transporter substrate-binding protein 0.71 0.70
    11 PS417_21750 acetyl-CoA synthetase 0.77 0.68
    12 PS417_17490 ABC transporter ATP-binding protein 0.75 0.63
    13 PS417_17505 LuxR family transcriptional regulator 0.83 0.62
    14 PS417_17455 cytochrome C 0.89 0.61
    15 PS417_19965 histidine kinase 0.67 0.60
    16 PS417_16570 isocitrate lyase 0.70 0.59
    17 PS417_24765 membrane protein 0.27 0.55
    18 PS417_26040 malate synthase no 0.55
    19 PS417_04860 ATPase 0.25 0.48
    20 PS417_21035 multidrug transporter no 0.44

    Or look for negative cofitness