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  • Top cofit genes for PS417_25900 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03925 nicotinate-nucleotide pyrophosphorylase 0.24 0.23
    2 PS417_22385 quinolinate synthase A 0.30 0.22
    3 PS417_05235 peptidase inhibitor I42 no 0.22
    4 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) no 0.20
    5 PS417_20125 phosphoribosylglycinamide formyltransferase 0.36 0.19
    6 PS417_19780 anti-anti-sigma factor no 0.19
    7 PS417_11755 diacetyl reductase no 0.18
    8 PS417_08290 potassium-transporting ATPase subunit B no 0.18
    9 PS417_07115 L-aspartate oxidase no 0.18
    10 PS417_20550 hypothetical protein no 0.17
    11 PS417_05130 glutaredoxin no 0.17
    12 PS417_19565 TetR family transcriptional regulator 0.29 0.17
    13 PS417_21050 serine acetyltransferase no 0.17
    14 PS417_18300 transcriptional regulator no 0.17
    15 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein no 0.16
    16 PS417_00550 hypothetical protein no 0.16
    17 PS417_19965 histidine kinase 0.40 0.16
    18 PS417_21040 sulfurylase no 0.16
    19 PS417_26045 hypothetical protein no 0.16
    20 PS417_00620 GntR family transcriptional regulator no 0.16

    Or look for negative cofitness