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  • Top cofit genes for GFF5056 from Variovorax sp. SCN45

    Fumarylacetoacetase (EC 3.7.1.2)
    SEED: Fumarylacetoacetase (EC 3.7.1.2)
    KEGG: fumarylacetoacetase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3008 hypothetical protein no 0.51
    2 GFF6167 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.50
    3 GFF6712 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.49
    4 GFF6562 T1SS secreted agglutinin RTX no 0.49
    5 GFF6680 Aspartate ammonia-lyase (EC 4.3.1.1) no 0.49
    6 GFF3322 hypothetical protein no 0.49
    7 GFF3862 hypothetical protein no 0.48
    8 GFF258 Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298) no 0.48
    9 GFF3164 Aerobic cobaltochelatase CobS subunit (EC 6.6.1.2) no 0.47
    10 GFF6706 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) no 0.47
    11 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.75 0.47
    12 GFF3956 no description no 0.47
    13 GFF1571 Transcriptional regulator, LysR family no 0.47
    14 GFF6536 protein of unknown function DUF1345 no 0.47
    15 GFF4238 no description no 0.46
    16 GFF4371 FIG074102: hypothetical protein no 0.45
    17 GFF3796 putative lipoprotein no 0.45
    18 GFF3179 hypothetical protein no 0.45
    19 GFF5286 Ferrichrome-iron receptor 0.36 0.44
    20 GFF2102 no description no 0.44

    Or look for negative cofitness