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  • Top cofit genes for GFF5054 from Variovorax sp. SCN45

    Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
    SEED: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
    KEGG: homogentisate 1,2-dioxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF650 Response regulator no 0.59
    2 GFF6634 DNA mismatch repair protein MutS 0.50 0.57
    3 GFF3175 Uncharacterized MFS-type transporter no 0.56
    4 GFF5958 FIG00537018: hypothetical protein no 0.56
    5 GFF1346 hypothetical protein 0.36 0.56
    6 GFF3419 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.55
    7 GFF5721 Flagellar L-ring protein FlgH 0.14 0.55
    8 GFF1682 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.55
    9 GFF7263 Malate dehydrogenase (EC 1.1.1.37) no 0.55
    10 GFF4095 no description no 0.54
    11 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) 0.92 0.53
    12 GFF632 Urea ABC transporter, ATPase protein UrtE no 0.53
    13 GFF1914 Guanine deaminase (EC 3.5.4.3) no 0.52
    14 GFF6547 Glutathione S-transferase (EC 2.5.1.18) no 0.52
    15 GFF3960 3'-to-5' oligoribonuclease (orn) no 0.52
    16 GFF6218 no description no 0.52
    17 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) 0.54 0.52
    18 GFF7010 no description no 0.51
    19 GFF6399 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), N-terminal domain 0.74 0.51
    20 GFF5219 2-aminoethylphosphonate ABC transporter permease protein no 0.51

    Or look for negative cofitness