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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF5052 from
Sphingobium sp. HT1-2
Pirin
SEED: Pirin-related protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4959
UPF0301 protein YqgE
0.46
0.95
2
GFF3505
ABC transporter, fused permease protein
0.22
0.92
3
GFF1930
Gluconolactonase (EC 3.1.1.17)
no
0.90
4
GFF4665
hypothetical protein
no
0.90
5
GFF5338
Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8)
no
0.88
6
GFF1721
Xylan 1,4-beta-xylosidase (EC 3.2.1.37)
no
0.88
7
GFF2063
hypothetical protein
no
0.87
8
GFF3683
Probable low-affinity inorganic phosphate transporter
no
0.87
9
GFF376
hypothetical protein
no
0.86
10
GFF4184
Histone acetyltransferase HPA2 and related acetyltransferases
0.36
0.86
11
GFF3914
Chloride channel protein
no
0.85
12
GFF4128
Membrane alanine aminopeptidase N (EC 3.4.11.2)
0.51
0.85
13
GFF3104
Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7)
no
0.85
14
GFF2758
hypothetical protein
no
0.85
15
GFF1663
Uncharacterized MFS-type transporter
no
0.85
16
GFF2377
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
no
0.85
17
GFF484
Predicted carboxypeptidase
no
0.84
18
GFF3500
Sulfatase modifying factor 1 precursor (C-alpha-formyglycine- generating enzyme 1)
no
0.84
19
GFF1158
di-heme cytochrome c peroxidase
no
0.84
20
GFF5038
hypothetical protein
no
0.84
Or look for
negative cofitness