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Cofit
Protein
Homologs
Top cofit genes for GFF5051 from
Variovorax sp. SCN45
MBL-fold metallohydrolase SPO0683
SEED: Cyclase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5433
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.71
2
GFF2152
twitching motility protein PilH
no
0.64
3
GFF2792
Chaperone protein ClpB (ATP-dependent unfoldase)
no
0.60
4
GFF3249
Guanyl-specific ribonuclease (EC 3.1.27.3)
no
0.59
5
GFF5521
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128)
no
0.59
6
GFF6686
Peroxide stress regulator; Ferric uptake regulation protein; Fe2+/Zn2+ uptake regulation proteins
no
0.58
7
GFF3261
FIG003003: hypothetical protein
0.22
0.58
8
GFF1194
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)
no
0.58
9
GFF2555
FIG00932538: hypothetical protein
no
0.57
10
GFF2533
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
no
0.56
11
GFF4000
ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)
no
0.56
12
GFF5080
DNA recombination-dependent growth factor RdgC
no
0.55
13
GFF531
hypothetical protein
no
0.55
14
GFF2505
hypothetical protein
no
0.55
15
GFF3330
Isohexenylglutaconyl-CoA hydratase (EC 4.2.1.57)
no
0.54
16
GFF2506
Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-)
no
0.53
17
GFF4618
Hexuronate utilization operon transcriptional repressor ExuR
no
0.53
18
GFF1962
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
no
0.52
19
GFF1022
Acetyltransferase, GNAT family
no
0.52
20
GFF2354
FIG00555615: hypothetical protein
no
0.52
Or look for
negative cofitness