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  • Top cofit genes for GFF5046 from Variovorax sp. SCN45

    putative lipoprotein
    SEED: Probable lipoprotein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF306 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.50
    2 GFF3210 hypothetical protein no 0.50
    3 GFF2267 Integral membrane protein no 0.48
    4 GFF3301 Lignostilbene-alpha,beta-dioxygenase and related enzymes no 0.47
    5 GFF194 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.32 0.47
    6 GFF6465 hypothetical protein no 0.47
    7 GFF3079 hypothetical protein no 0.46
    8 GFF4655 SAM-dependent methyltransferase no 0.46
    9 GFF3823 FIG00581576: hypothetical protein no 0.45
    10 GFF838 hypothetical protein no 0.44
    11 GFF3570 Organic hydroperoxide resistance transcriptional regulator no 0.43
    12 GFF6229 hypothetical protein no 0.43
    13 GFF4433 1,6-anhydro-N-acetylmuramyl-L-alanine amidase 0.37 0.43
    14 GFF4563 Ferredoxin, 2Fe-2S no 0.43
    15 GFF4924 Transmembrane component BioN of energizing module of biotin ECF transporter no 0.42
    16 GFF6350 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.42
    17 GFF3217 hypothetical protein no 0.42
    18 GFF3256 Peptidase, M20/M25/M40 family no 0.41
    19 GFF2493 YheO-like PAS domain no 0.41
    20 GFF2088 Putative lipase in cluster with Phosphatidate cytidylyltransferase 0.32 0.40

    Or look for negative cofitness