Top cofit genes for GFF5046 from Hydrogenophaga sp. GW460-11-11-14-LB1

ABC-type amino acid transport system, permease component
SEED: ABC-type amino acid transport system, permease component

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF5673		Phage protein	no	0.52
2	GFF3530		ATP-dependent RNA helicase RhlE	no	0.51
3	GFF833		hypothetical protein	no	0.51
4	GFF107		Transcriptional regulator, LuxR family	no	0.51
5	GFF527		FIG01200701: possible membrane protein	no	0.47
6	GFF2745		ring-cleaving dioxygenase, putative	no	0.46
7	GFF2674		Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme	no	0.45
8	GFF2402		Transcriptional regulator, LysR family	no	0.44
9	GFF644		type IV pili signal transduction protein PilI	no	0.44
10	GFF4390		putative plasmid stabilization protein	no	0.44
11	GFF3128		Mobile element protein	no	0.43
12	GFF3801		Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8)	no	0.43
13	GFF2612		Ribosome hibernation protein YhbH	no	0.42
14	GFF2995		phosphoesterase, PA-phosphatase related	no	0.42
15	GFF1691		Rare lipoprotein A precursor	no	0.42
16	GFF4967		Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	no	0.42
17	GFF1667		Phosphate starvation-inducible protein PhoH, predicted ATPase	no	0.42
18	GFF4258		FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	no	0.42
19	GFF3382		Aconitate hydratase (EC 4.2.1.3)	no	0.42
20	GFF4921		3'-to-5' exoribonuclease RNase R	no	0.41

Or look for negative cofitness