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  • Top cofit genes for GFF5036 from Variovorax sp. SCN45

    Opine oxidase subunit B
    SEED: Sarcosine oxidase beta subunit (EC 1.5.3.1)
    KEGG: sarcosine oxidase, subunit beta

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.58
    2 GFF5383 DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) no 0.57
    3 GFF5035 Opine oxidase subunit A 0.85 0.53
    4 GFF5424 Membrane protein TerC, possibly involved in tellurium resistance no 0.52
    5 GFF6324 Kup system potassium uptake protein 0.41 0.51
    6 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.51
    7 GFF2603 Tripartite tricarboxylate transporter TctC family no 0.51
    8 GFF5080 DNA recombination-dependent growth factor RdgC no 0.50
    9 GFF6767 no description no 0.50
    10 GFF5205 Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30) no 0.49
    11 GFF5877 Probable proline rich signal peptide protein no 0.48
    12 GFF4015 KEGG: lactoylglutathione lyase no 0.48
    13 GFF4970 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.47
    14 GFF2932 Uncharacterized protein YeaG no 0.47
    15 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.47
    16 GFF3424 FIG00443816: hypothetical protein 0.37 0.47
    17 GFF3618 Transcriptional regulator, LysR family no 0.47
    18 GFF3085 no description no 0.46
    19 GFF2734 DNA topoisomerase IV subunit B (EC 5.99.1.3) no 0.46
    20 GFF6884 FIG00932717: hypothetical protein no 0.46

    Or look for negative cofitness