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Cofit
Protein
Homologs
Top cofit genes for GFF5035 from
Variovorax sp. SCN45
Opine oxidase subunit A
SEED: Opine oxidase subunit A
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF240
Cytosol aminopeptidase PepA (EC 3.4.11.1)
0.41
0.74
2
GFF4000
ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)
no
0.73
3
GFF6324
Kup system potassium uptake protein
0.39
0.70
4
GFF5429
Iron(III) dicitrate transport protein FecA
no
0.69
5
GFF2836
MotA/TolQ/ExbB proton channel family protein
no
0.69
6
GFF2835
putative TonB-dependent receptor
no
0.67
7
GFF232
Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18)
no
0.67
8
GFF1119
Ribonuclease HI (EC 3.1.26.4)
no
0.66
9
GFF5424
Membrane protein TerC, possibly involved in tellurium resistance
no
0.64
10
GFF6272
no description
no
0.62
11
GFF4015
KEGG: lactoylglutathione lyase
no
0.62
12
GFF5572
FIG00984604: hypothetical protein
0.35
0.60
13
GFF5262
Ferric iron ABC transporter, iron-binding protein
no
0.57
14
GFF2521
FIG00931781: hypothetical protein
no
0.57
15
GFF5521
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128)
no
0.57
16
GFF5288
Uncharacterized protein PA4513
0.46
0.56
17
GFF5080
DNA recombination-dependent growth factor RdgC
0.38
0.55
18
GFF6392
hypothetical protein
no
0.55
19
GFF1336
ABC transporter, substrate-binding protein RSc1750
no
0.55
20
GFF5052
FAD-dependent oxidoreductase SPO0682
no
0.55
Or look for
negative cofitness