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  • Top cofit genes for GFF5029 from Variovorax sp. SCN45

    Transcriptional regulator, IclR family
    SEED: Transcriptional regulator, IclR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3710 Lactoylglutathione lyase and related lyases no 0.63
    2 GFF1995 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) 0.26 0.62
    3 GFF6207 Allantoin racemase (EC 5.1.99.3) no 0.61
    4 GFF1585 Outer membrane porin protein 32 precursor no 0.57
    5 GFF40 no description no 0.56
    6 GFF4192 no description no 0.56
    7 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.55
    8 GFF3999 GMP reductase (EC 1.7.1.7) no 0.54
    9 GFF3932 Acetyltransferase, GNAT family no 0.54
    10 GFF1211 D-aminopeptidase (EC 3.4.11.19) no 0.53
    11 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.52
    12 GFF1637 Polyketide synthase modules and related proteins no 0.52
    13 GFF1842 Transcriptional regulator, LysR family 0.24 0.52
    14 GFF5669 hypothetical protein no 0.52
    15 GFF1820 FIG137887: membrane protein related to purine degradation no 0.51
    16 GFF3470 Permease of the drug/metabolite transporter (DMT) superfamily no 0.51
    17 GFF5747 Flagellum-specific ATP synthase FliI no 0.51
    18 GFF2235 hypothetical protein no 0.51
    19 GFF4879 Transcriptional regulator, Xre family no 0.50
    20 GFF1971 Creatinine amidohydrolase (EC 3.5.2.10) no 0.50

    Or look for negative cofitness