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  • Top cofit genes for PS417_02560 from Pseudomonas simiae WCS417

    23S rRNA methyltransferase
    SEED: 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)
    KEGG: RNA methyltransferase, TrmH family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_20930 50S rRNA methyltransferase 0.75 0.41
    2 PS417_24500 DEAD/DEAH box helicase 0.23 0.40
    3 PS417_26370 RNA helicase 0.49 0.38
    4 PS417_25650 anhydro-N-acetylmuramic acid kinase 0.48 0.36
    5 PS417_25645 peptidase M23 0.29 0.35
    6 PS417_20650 hypothetical protein no 0.34
    7 PS417_06135 glycerol-3-phosphate acyltransferase no 0.34
    8 PS417_25120 capsular biosynthesis protein no 0.34
    9 PS417_01340 agmatine deiminase 0.51 0.33
    10 PS417_25790 aminoglycoside phosphotransferase 0.37 0.33
    11 PS417_24335 50S rRNA methyltransferase 0.37 0.31
    12 PS417_22815 permease 0.35 0.31
    13 PS417_03165 hypothetical protein no 0.31
    14 PS417_24230 ATP-dependent protease 0.52 0.31
    15 PS417_12200 microcin ABC transporter permease 0.57 0.31
    16 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase 0.60 0.31
    17 PS417_17125 transcriptional regulator no 0.30
    18 PS417_08530 spermidine synthase 0.62 0.30
    19 PS417_04290 hypothetical protein 0.87 0.30
    20 PS417_07620 beta-hexosaminidase 0.58 0.30

    Or look for negative cofitness