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  • Top cofit genes for GFF502 from Variovorax sp. SCN45

    Hydrolase
    KEGG: putative hydrolase of the HAD superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2137 Ribose operon repressor no 0.61
    2 GFF190 Ankyrin no 0.59
    3 GFF6087 Transcriptional regulator, AcrR family no 0.58
    4 GFF4132 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.57
    5 GFF2716 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) no 0.57
    6 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) no 0.56
    7 GFF4413 CopG domain-containing protein no 0.56
    8 GFF3974 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.55
    9 GFF836 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.55
    10 GFF4189 NUDIX hydrolase no 0.55
    11 GFF1155 Putative transmembrane protein no 0.54
    12 GFF2602 no description no 0.54
    13 GFF4449 TldD protein, part of TldE/TldD proteolytic complex no 0.53
    14 GFF1015 ABC-type antimicrobial peptide transport system, ATPase component 0.29 0.53
    15 GFF2564 Two-component transcriptional response regulator, LuxR family no 0.53
    16 GFF4490 Site-specific tyrosine recombinase XerC 0.35 0.53
    17 GFF784 KEGG: RNA polymerase sigma-70 factor, ECF subfamily 0.29 0.53
    18 GFF2253 no description no 0.53
    19 GFF216 Transmembrane regulator protein PrtR no 0.52
    20 GFF741 Transcriptional regulator, LysR family no 0.52

    Or look for negative cofitness