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Cofit
Protein
Homologs
Top cofit genes for PS417_25705 from
Pseudomonas simiae WCS417
lipoate--protein ligase
SEED: Lipoate-protein ligase A
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_23730
LysR family transcriptional regulator
0.68
0.62
2
PS417
_13835
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
(from data)
0.72
0.58
3
PS417
_20580
isocitrate dehydrogenase
0.56
0.48
4
PS417
_12665
hypothetical protein
0.31
0.47
5
PS417
_13840
isobutyryl-CoA dehydrogenase (EC 1.3.8.5)
(from data)
0.69
0.45
6
PS417
_21065
3-methylitaconate isomerase
0.46
0.44
7
PS417
_17560
Dihydrolipoyl dehydrogenase (EC 1.8.1.4)
(from data)
0.60
0.40
8
PS417
_21275
GntR family transcriptional regulator
0.55
0.39
9
PS417
_01180
ribosomal protein S6 modification protein
0.21
0.37
10
PS417
_27210
AsnC family transcriptional regulator
0.60
0.36
11
PS417
_17545
2-oxoisovalerate dehydrogenase
0.65
0.33
12
PS417
_15935
Rrf2 family transcriptional regulator
0.43
0.33
13
PS417
_23690
Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1)
(from data)
0.21
0.33
14
PS417
_19335
isochorismatase
0.26
0.31
15
PS417
_10535
hypothetical protein
no
0.29
16
PS417
_23725
methylmalonate-semialdehyde dehydrogenase
0.74
0.28
17
PS417
_00560
NAD synthetase
no
0.25
18
PS417
_21070
aconitate hydratase
0.51
0.24
19
PS417
_12315
peptidylprolyl isomerase
0.21
0.24
20
PS417
_17550
branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4)
(from data)
0.63
0.24
Or look for
negative cofitness