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  • Top cofit genes for PS417_25700 from Pseudomonas simiae WCS417

    cyclic AMP receptor protein
    SEED: Vfr transcriptional regulator / Cyclic AMP receptor protein
    KEGG: CRP/FNR family transcriptional regulator, cyclic AMP receptor protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25970 diguanylate cyclase no 0.23
    2 PS417_16735 aldehyde dehydrogenase no 0.21
    3 PS417_04675 deoxyribonuclease 0.47 0.21
    4 PS417_00505 peptidase M16 no 0.21
    5 PS417_26875 histidine kinase no 0.19
    6 PS417_24265 ABC transporter ATP-binding protein 0.33 0.19
    7 PS417_17845 3,4-dihydroxyphenylacetate 2,3-dioxygenase no 0.18
    8 PS417_28250 cell wall assembly protein no 0.18
    9 PS417_02110 acyl carrier protein no 0.18
    10 PS417_19170 insecticidal toxin complex protein TcaB1 no 0.18
    11 PS417_08395 ABC transporter permease no 0.18
    12 PS417_20900 guanine deaminase no 0.18
    13 PS417_09225 C4-dicarboxylate ABC transporter no 0.17
    14 PS417_20165 hypothetical protein no 0.17
    15 PS417_12055 xylitol ABC transporter, substrate-binding component (from data) no 0.17
    16 PS417_01060 ABC transporter permease no 0.17
    17 PS417_16165 ABC transporter substrate-binding protein no 0.16
    18 PS417_20860 DNA polymerase III subunit gamma/tau 0.38 0.16
    19 PS417_19150 ABC transporter ATP-binding protein 0.43 0.16
    20 PS417_05145 23S rRNA methyltransferase no 0.16

    Or look for negative cofitness