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  • Top cofit genes for GFF5008 from Variovorax sp. SCN45

    InterPro IPR001258
    SEED: InterPro IPR001258

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6788 Multicopper oxidase no 0.46
    2 GFF6453 Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein no 0.45
    3 GFF5224 Uncharacterized MFS-type transporter no 0.45
    4 GFF1678 Transcriptional regulator, GntR family no 0.44
    5 GFF1026 Probable chromate transporter protein no 0.44
    6 GFF2528 ABC transporter, ATP-binding protein PA3838 no 0.44
    7 GFF5664 hypothetical protein no 0.42
    8 GFF3793 no description no 0.42
    9 GFF375 hypothetical protein no 0.41
    10 GFF316 Transmembrane protein no 0.41
    11 GFF5299 TonB-dependent receptor no 0.41
    12 GFF5990 RND efflux system, inner membrane transporter no 0.40
    13 GFF6044 FIG00933533: hypothetical protein 0.31 0.40
    14 GFF751 probable acetyltransferase protein no 0.39
    15 GFF5500 hypothetical protein no 0.39
    16 GFF2404 Hypothetical protein with Rieske (2Fe-2S) region no 0.39
    17 GFF7340 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.39
    18 GFF5426 Phosphoenolpyruvate synthase (EC 2.7.9.2) no 0.38
    19 GFF2596 Multidrug resistance transporter, Bcr/CflA family no 0.38
    20 GFF1750 BUG/TctC family periplasmic protein no 0.38

    Or look for negative cofitness