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  • Top cofit genes for GFF5007 from Variovorax sp. SCN45

    probable membrane protein STY4873
    SEED: probable membrane protein STY4873

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3075 Surface antigen no 0.59
    2 GFF940 Permease of the drug/metabolite transporter (DMT) superfamily no 0.57
    3 GFF6018 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase no 0.56
    4 GFF2352 FIG140336: TPR domain protein no 0.56
    5 GFF1474 Transcriptional regulator, LysR family no 0.55
    6 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.54
    7 GFF4611 Predicted transcriptional regulator for fatty acid degradation FadP, TetR family no 0.53
    8 GFF1485 Transcriptional regulator, AraC family no 0.53
    9 GFF3180 FIG00348182: hypothetical protein no 0.53
    10 GFF495 Kup system potassium uptake protein no 0.52
    11 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) no 0.52
    12 GFF5260 Uncharacterized protein ygiD 0.21 0.52
    13 GFF151 FIG00460174: hypothetical protein no 0.51
    14 GFF1030 Ferredoxin reductase no 0.51
    15 GFF7291 Magnesium and cobalt transport protein CorA 0.35 0.51
    16 GFF6657 Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system no 0.51
    17 GFF1748 Outer membrane lipoprotein no 0.50
    18 GFF1247 Sulfate and thiosulfate binding protein CysP no 0.50
    19 GFF1750 BUG/TctC family periplasmic protein no 0.50
    20 GFF6735 hypothetical protein no 0.49

    Or look for negative cofitness