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  • Top cofit genes for GFF500 from Variovorax sp. SCN45

    Lysine exporter protein (LYSE/YGGA)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF857 no description no 0.58
    2 GFF6688 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases no 0.51
    3 GFF5269 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) no 0.51
    4 GFF5218 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.51
    5 GFF6122 ABC-type antimicrobial peptide transport system, permease component no 0.50
    6 GFF5461 2-dehydrotetronate isomerase (EC 5.3.1.35) no 0.50
    7 GFF5948 hypothetical protein no 0.46
    8 GFF358 hypothetical protein no 0.46
    9 GFF4783 Penicillin acylase (EC 3.5.1.11) no 0.46
    10 GFF5453 Alkaline phosphatase (EC 3.1.3.1) no 0.46
    11 GFF1663 Isocitrate lyase (EC 4.1.3.1) no 0.46
    12 GFF635 Urea ABC transporter, permease protein UrtB no 0.45
    13 GFF801 Murein hydrolase activator NlpD no 0.45
    14 GFF3994 hypothetical protein no 0.45
    15 GFF7389 Cyclohexanone monooxygenase (EC 1.14.13.22) no 0.45
    16 GFF4735 Nitrate ABC transporter, ATP-binding protein no 0.44
    17 GFF3879 Uncharacterized protein, similar to the N-terminal domain of Lon protease no 0.44
    18 GFF555 Putative inner membrane protein no 0.44
    19 GFF2121 Type IV fimbrial biogenesis protein PilY1 no 0.44
    20 GFF6831 hypothetical protein no 0.44

    Or look for negative cofitness