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  • Top cofit genes for GFF50 from Variovorax sp. SCN45

    Murein hydrolase activator NlpD
    KEGG: lipoprotein NlpD

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF536 no description no 0.67
    2 GFF2100 no description no 0.66
    3 GFF6373 T6SS component TssA (ImpA) no 0.62
    4 GFF5432 Glutathione S-transferase family protein no 0.60
    5 GFF6997 Flagellar basal-body rod protein FlgC no 0.59
    6 GFF1779 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) no 0.59
    7 GFF5263 Ferric iron ABC transporter, permease protein no 0.57
    8 GFF1788 hypothetical protein no 0.57
    9 GFF7282 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) no 0.57
    10 GFF4968 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit no 0.57
    11 GFF2739 Putative SAM-dependent methyltransferase Bucepa02006346 no 0.56
    12 GFF491 no description no 0.56
    13 GFF3409 Probable lipoprotein signal peptide no 0.56
    14 GFF2597 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) no 0.56
    15 GFF4632 Glycosyl transferase, family 2 no 0.55
    16 GFF4941 Gfa-like protein no 0.55
    17 GFF6194 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.55
    18 GFF2838 hypothetical protein no 0.55
    19 GFF6701 Regulatory protein, RpfE type no 0.55
    20 GFF665 hypothetical protein no 0.54

    Or look for negative cofitness